gnomad_hgdp_1kg_subset_sparse

• Versions: 3.1.2

• Reference genome builds: GRCh38

• Type: hail.MatrixTable

Schema (3.1.2, GRCh38)

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Global fields:
    None
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Column fields:
    's': str
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Row fields:
    'locus': locus<GRCh38>
    'alleles': array<str>
    'rsid': str
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Entry fields:
    'DP': int32
    'END': int32
    'GQ': int32
    'LA': array<int32>
    'LAD': array<int32>
    'LGT': call
    'LPGT': call
    'LPL': array<int32>
    'MIN_DP': int32
    'PID': str
    'RGQ': int32
    'SB': array<int32>
    'gvcf_info': struct {
        ClippingRankSum: float64,
        BaseQRankSum: float64,
        MQ: float64,
        MQRankSum: float64,
        MQ_DP: int32,
        QUALapprox: int32,
        RAW_MQ: float64,
        ReadPosRankSum: float64,
        VarDP: int32
    }
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Column key: ['s']
Row key: ['locus', 'alleles']
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