UK_Biobank_Rapid_GWAS_male

Schema (v2, GRCh37)

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Global fields:
    'metadata': struct {
        name: str,
        version: str,
        reference_genome: str,
        n_rows: int32,
        n_cols: int32,
        n_partitions: int32
    }
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Column fields:
    'phenotype': str
    'description': str
    'variable_type': str
    'source': str
    'n_non_missing': int32
    'n_missing': int32
    'n_controls': int32
    'n_cases': int32
    'PHESANT_transformation': str
    'notes': str
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Row fields:
    'locus': locus<GRCh37>
    'alleles': array<str>
    'variant': str
    'minor_allele': str
    'minor_AF': float64
    'rsid': str
    'varid': str
    'consequence': str
    'consequence_category': str
    'info': float64
    'call_rate': float64
    'alt_AC': int32
    'AF': float64
    'p_hwe': float64
    'n_called': int32
    'n_not_called': int32
    'n_hom_ref': int32
    'n_het': int32
    'n_hom_var': int32
    'n_non_ref': int32
    'r_heterozygosity': float64
    'r_het_hom_var': float64
    'r_expected_het_frequency': float64
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Entry fields:
    'expected_case_minor_AC': float64
    'expected_min_category_minor_AC': float64
    'low_confidence_variant': bool
    'n_complete_samples': int32
    'AC': float64
    'ytx': float64
    'beta': float64
    'se': float64
    'tstat': float64
    'pval': float64
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Column key: ['phenotype']
Row key: ['locus', 'alleles']
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